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  1. Home
  2. Indian Institute of Technology Madras
  3. Publication6
  4. Left-right axis asymmetry determining human Cryptic gene is transcriptionally repressed by Snail
 
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Left-right axis asymmetry determining human Cryptic gene is transcriptionally repressed by Snail

Date Issued
28-10-2016
Author(s)
Gupta, Kartik
Pilli, Vijaya Satish Sekhar
A Gopala Krishna 
Indian Institute of Technology, Madras
DOI
10.1186/s12861-016-0141-x
Abstract
Background: Establishment of the left-right axis is important for positioning organs asymmetrically in the developing vertebrate-embryo. A number of factors like maternally deposited molecules have emerged essential in initiating the specification of the axis; the downstream events, however, are regulated by signal-transduction and gene-expression changes identifying which remains a crucial challenge. The EGF-CFC family member Cryptic, that functions as a co-receptor for some TGF-beta ligands, is developmentally expressed in higher mammals and mutations in the gene cause loss or change in left-right axis asymmetry. Despite the strong phenotype, no transcriptional-regulator of this gene is known till date. Results: Using promoter-analyses tools, we found strong evidence that the developmentally essential transcription factor Snail binds to the human Cryptic-promoter. We cloned the promoter-region of human Cryptic in a reporter gene and observed decreased Cryptic-promoter activation upon increasing Snail expression. Further, the expression of Cryptic is down-regulated upon exogenous Snail expression, validating the reporter assays and the previously identified role of Snail as a transcriptional repressor. Finally, we demonstrate using gel-shift assay that Snail in nuclear extract of PANC1 cells interacts with the promoter-construct bearing putative Snail binding sites and confirm this finding using chromatin immunoprecipitation assay. Conclusions: Snail represses the expression of human Cryptic and therefore, might affect the signaling via Nodal that has previously been demonstrated to specify the left-right axis using the EGF-CFC co-receptors.
Volume
16
Subjects
  • Cryptic

  • EGF-CFC

  • Left-right-axis

  • Snail

  • Transcription

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