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Ab-CoV: a curated database for binding affinity and neutralization profiles of coronavirus-related antibodies
Date Issued
15-08-2022
Author(s)
Rawat, Puneet
Sharma, Divya
Prabakaran, R.
Ridha, Fathima
Mohkhedkar, Mugdha
Indian Institute of Technology, Madras
Indian Institute of Technology, Madras
Abstract
Summary: We have developed a database, Ab-CoV, which contains manually curated experimental interaction profiles of 1780 coronavirus-related neutralizing antibodies. It contains more than 3200 datapoints on half maximal inhibitory concentration (IC50), half maximal effective concentration (EC50) and binding affinity (KD). Each data with experimentally known three-dimensional structures are complemented with predicted change in stability and affinity of all possible point mutations of interface residues. Ab-CoV also includes information on epitopes and paratopes, structural features of viral proteins, sequentially similar therapeutic antibodies and Collier de Perles plots. It has the feasibility for structure visualization and options to search, display and download the data.
Volume
38